Outputs (25)

Genomic analysis of two novel bacteriophages infecting acinetobacter beijerinckii and halotolerans species (2023)
Journal Article
Gomes, M., Domingues, R., Turner, D., & Oliveira, H. (2023). Genomic analysis of two novel bacteriophages infecting acinetobacter beijerinckii and halotolerans species. Viruses, 15(3), 643. https://doi.org/10.3390/v15030643

Bacteriophages are the most diverse genetic entities on Earth. In this study, two novel bacteriophages, nACB1 (Podoviridae morphotype) and nACB2 (Myoviridae morphotype), which infect Acinetobacter beijerinckii and Acinetobacter halotolerans, respecti... Read More about Genomic analysis of two novel bacteriophages infecting acinetobacter beijerinckii and halotolerans species.

Four principles to establish a universal virus taxonomy (2023)
Journal Article
Simmonds, P., Adriaenssens, E. M., Zerbini, F. M., Abrescia, N. G. A., Aiewsakun, P., Alfenas-Zerbini, P., …Vasilakis, N. (2023). Four principles to establish a universal virus taxonomy. PLoS Biology, 21(2), e3001922. https://doi.org/10.1371/journal.pbio.3001922

A universal taxonomy of viruses is essential for a comprehensive view of the virus world and for communicating the complicated evolutionary relationships among viruses. However, there are major differences in the conceptualisation and approaches to v... Read More about Four principles to establish a universal virus taxonomy.

Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee (2023)
Journal Article
Turner, D., Shkoporov, A. N., Lood, C., Millard, A. D., Dutilh, B. E., Alfenas-Zerbini, P., …Adriaenssens, E. M. (2023). Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee. Archives of Virology, 168(2), 74. https://doi.org/10.1007/s00705-022-05694-2

This article summarises the activities of the Bacterial Viruses Subcommittee of the International Committee on Taxonomy of Viruses for the period of March 2021−March 2022. We provide an overview of the new taxa proposed in 2021, approved by the Execu... Read More about Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee.

Complete genome sequence of Pseudomonas Phage Motto (2022)
Journal Article
Manohar, P., Loganathan, A., Nachimuthu, R., Loh, B., Ma, L., Turner, D., & Leptihn, S. (2022). Complete genome sequence of Pseudomonas Phage Motto. Microbiology Resource Announcements, 11(11), https://doi.org/10.1128/mra.00740-22

We describe the complete genome sequence of bacteriophage Motto, which infects clinical strains of Pseudomonas aeruginosa. Motto is a T1-like siphovirus related to members of the family Drexlerviridae and has a capsid width of;57 nm and a tail length... Read More about Complete genome sequence of Pseudomonas Phage Motto.

The control of waterborne pathogenic bacteria in fresh water using a biologically active filter (2022)
Journal Article
Steven, J. A. C., Thorn, R. M. S., Robinson, G. M., Turner, D., Lee, J. E., & Reynolds, D. M. (2022). The control of waterborne pathogenic bacteria in fresh water using a biologically active filter. npj Clean Water, 5(1), 30. https://doi.org/10.1038/s41545-022-00169-y

The aim of this study was to investigate the control of three species of bacteria commonly associated with biologically contaminated water, using biofiltration. In this study, a laboratory-scale biofilter system was used to investigate the control of... Read More about The control of waterborne pathogenic bacteria in fresh water using a biologically active filter.

ICTV virus taxonomy profile: Chaseviridae 2022 (2022)
Journal Article
Anany, H., Mahadevan, P., Turner, D., Adriaenssens, E. M., Kropinski, A. M., & ICTV Report Consortium. (2022). ICTV virus taxonomy profile: Chaseviridae 2022. Journal of General Virology, 103(4), https://doi.org/10.1099/jgv.0.001715

Members of the family Chaseviridae are lytic bacterial viruses infecting representatives of the bacterial class Gammaproteobacteria. Chaseviruses have a global distribution. Virions of members of this family have a myovirus morphology (icosahedral he... Read More about ICTV virus taxonomy profile: Chaseviridae 2022.

Diversity of carbapenem-resistant Acinetobacter baumannii and bacteriophage-mediated spread of the Oxa23 carbapenemase (2022)
Journal Article
Abouelfetouh, A., Mattock, J., Turner, D., Li, E., & Evans, B. A. (2022). Diversity of carbapenem-resistant Acinetobacter baumannii and bacteriophage-mediated spread of the Oxa23 carbapenemase. Microbial Genomics, 8(2), Article 000752. https://doi.org/10.1099/mgen.0.000752

Carbapenem-resistant Acinetobacter baumannii are prevalent in low- and middle-income countries such as Egypt, but little is known about the molecular epidemiology and mechanisms of resistance in these settings. Here, we characterize carbapenem-resist... Read More about Diversity of carbapenem-resistant Acinetobacter baumannii and bacteriophage-mediated spread of the Oxa23 carbapenemase.

Genomic diversity of bacteriophages infecting the genus acinetobacter (2022)
Journal Article
Oliveira, H., Domingues, R., Evans, B., Sutton, J. M., Adriaenssens, E. M., & Turner, D. (2022). Genomic diversity of bacteriophages infecting the genus acinetobacter. Viruses, 14(2), Article 181. https://doi.org/10.3390/v14020181

The number of sequenced Acinetobacter phage genomes in the International Nucleotide Sequence Database Collaboration has increased significantly in recent years, from 37 in 2017 to a total of 139 as of January 2021 with genome sizes ranging from 31 to... Read More about Genomic diversity of bacteriophages infecting the genus acinetobacter.

Phage annotation guide: Guidelines for assembly and high-quality annotation (2021)
Journal Article
Turner, D., Adriaenssens, E. M., Tolstoy, I., & Kropinski, A. M. (2021). Phage annotation guide: Guidelines for assembly and high-quality annotation. PHAGE Therapy, Applications, and Research, 2(4), 170-182. https://doi.org/10.1089/phage.2021.0013

All sequencing projects of bacteriophages (phages) should seek to report an accurate and comprehensive annotation of their genomes. This article defines 14 questions for those new to phage genomics that should be addressed before submitting a genome... Read More about Phage annotation guide: Guidelines for assembly and high-quality annotation.

Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: Update of taxonomy changes in 2021 (2021)
Journal Article
Krupovic, M., Turner, D., Morozova, V., Dyall-Smith, M., Oksanen, H. M., Edwards, R., …Adriaenssens, E. M. (2021). Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: Update of taxonomy changes in 2021. Archives of Virology, 166, 3239–3244. https://doi.org/10.1007/s00705-021-05205-9

In this article, we – the Bacterial Viruses Subcommittee and the Archaeal Viruses Subcommittee of the International Committee on Taxonomy of Viruses (ICTV) – summarise the results of our activities for the period March 2020 – March 2021. We report th... Read More about Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: Update of taxonomy changes in 2021.